Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm22020-201ENSMUST00000104358 136 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm23537-201ENSMUST00000157536 330 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm8826-201ENSMUST00000193161 948 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm20056-201ENSMUST00000194813 519 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm13998-201ENSMUST00000120952 335 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm22952-201ENSMUST00000116720 120 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm11759-201ENSMUST00000121742 464 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm20586-201ENSMUST00000210122 547 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm24989-201ENSMUST00000104461 88 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm13265-201ENSMUST00000118090 421 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm14037-201ENSMUST00000120576 313 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm22350-201ENSMUST00000083924 156 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.26□□□□□ -1.41
Col6a3E9PWQ3 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a3E9PWQ3 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms