Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm13642-201ENSMUST00000121697 381 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm25435-201ENSMUST00000158277 267 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm7426-201ENSMUST00000179046 404 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm6055-201ENSMUST00000180532 378 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm5694-201ENSMUST00000195648 641 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm5717-201ENSMUST00000198243 1062 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 CT009728.1-201ENSMUST00000225228 1050 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm24924-201ENSMUST00000084007 164 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm15311-201ENSMUST00000119682 282 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm15305-201ENSMUST00000120354 288 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm14054-201ENSMUST00000120744 704 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm12181-201ENSMUST00000121448 531 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm24395-201ENSMUST00000158139 125 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm27018-201ENSMUST00000181136 225 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm44221-201ENSMUST00000203552 388 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm7368-201ENSMUST00000213307 367 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 CT009738.1-201ENSMUST00000219031 809 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm5928-201ENSMUST00000221839 466 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.86□□□□□ -1.47
Scrt1Q99M85 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scrt1Q99M85 Gm15500-201ENSMUST00000071523 894 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms