Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm14772-201ENSMUST00000116562 514 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm13176-201ENSMUST00000117910 477 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm11501-201ENSMUST00000118039 581 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm5319-201ENSMUST00000118965 873 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm11445-201ENSMUST00000119101 532 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm13487-201ENSMUST00000122240 864 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Mir1953-201ENSMUST00000157866 89 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm23891-201ENSMUST00000158114 138 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm9672-201ENSMUST00000166437 425 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm18040-201ENSMUST00000217922 827 ntBASIC7.82□□□□□ -1.16
Vps53Q8CCB4 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Vps53Q8CCB4 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm23485-201ENSMUST00000104181 155 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm14158-201ENSMUST00000118409 308 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm12583-201ENSMUST00000120677 853 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm16016-201ENSMUST00000120831 550 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm11472-201ENSMUST00000121305 556 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm5871-201ENSMUST00000176461 718 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Mir6911-201ENSMUST00000184241 69 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Trbv27-201ENSMUST00000193711 277 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm37490-201ENSMUST00000195566 724 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 AC132384.6-201ENSMUST00000218976 1206 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Prl7a1-203ENSMUST00000224852 1283 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.81□□□□□ -1.16
Vps53Q8CCB4 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.81□□□□□ -1.16
Vps53Q8CCB4 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm23430-201ENSMUST00000122490 314 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms