Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm16298-201ENSMUST00000161107 420 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm17194-201ENSMUST00000164610 348 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm5871-201ENSMUST00000176461 718 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm8245-201ENSMUST00000182434 987 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm24826-202ENSMUST00000197298 216 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm44138-201ENSMUST00000204939 271 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm44909-201ENSMUST00000208756 165 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm45432-201ENSMUST00000210391 416 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gm19176-201ENSMUST00000222149 1831 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 AC161374.1-201ENSMUST00000224191 794 ntBASIC9.18□□□□□ -0.94
Nkx2-3P97334 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nkx2-3P97334 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm14976-201ENSMUST00000117055 1394 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm13566-201ENSMUST00000117428 1142 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm15233-201ENSMUST00000118747 400 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm14869-201ENSMUST00000119007 884 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm12710-201ENSMUST00000119011 216 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm11357-201ENSMUST00000119758 954 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm14054-201ENSMUST00000120744 704 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm7494-201ENSMUST00000121248 441 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm5166-201ENSMUST00000121332 573 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm13808-201ENSMUST00000121353 184 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm26323-201ENSMUST00000157743 175 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm23034-201ENSMUST00000158001 147 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm23145-201ENSMUST00000178912 79 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm26729-201ENSMUST00000180744 352 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm27186-201ENSMUST00000184223 307 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm44566-201ENSMUST00000207638 304 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm18338-201ENSMUST00000222381 560 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 CT030684.2-201ENSMUST00000228946 826 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 AC159193.3-201ENSMUST00000221902 2622 ntBASIC9.17□□□□□ -0.94
Nkx2-3P97334 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nkx2-3P97334 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nkx2-3P97334 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nkx2-3P97334 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Nkx2-3P97334 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nkx2-3P97334 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms