Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Chd1P40201 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Chd1P40201 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Chd1P40201 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Gm43323-201ENSMUST00000202328 4258 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Gm43684-201ENSMUST00000199279 6573 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Gm25415-201ENSMUST00000104220 132 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Gm26172-201ENSMUST00000158421 134 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm27887-201ENSMUST00000184367 102 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm7626-201ENSMUST00000195801 353 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm2287-202ENSMUST00000199619 1000 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm3148-201ENSMUST00000203594 612 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Chd1P40201 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Gm37423-201ENSMUST00000194246 3342 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Gm4973-201ENSMUST00000206925 1334 ntBASIC9.74□□□□□ -0.85
Chd1P40201 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.74□□□□□ -0.85
Chd1P40201 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Chd1P40201 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Gm12287-201ENSMUST00000119770 707 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm13207-201ENSMUST00000119862 773 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd1P40201 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Gm22492-201ENSMUST00000157192 297 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm27004-201ENSMUST00000183300 727 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm27985-201ENSMUST00000185112 378 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm44432-201ENSMUST00000203342 938 ntBASIC9.73□□□□□ -0.85
Chd1P40201 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd1P40201 AC166369.2-201ENSMUST00000228403 308 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd1P40201 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd1P40201 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Gm43557-201ENSMUST00000197100 2370 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm15838-201ENSMUST00000161575 180 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Gm16531-201ENSMUST00000180658 967 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm38670-201ENSMUST00000199248 77 ntBASIC9.73□□□□□ -0.85
Chd1P40201 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Gm43946-201ENSMUST00000204058 886 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Gm18705-201ENSMUST00000215985 913 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd1P40201 AC125117.2-201ENSMUST00000228344 1140 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd1P40201 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Chd1P40201 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Chd1P40201 Gm44620-201ENSMUST00000209183 2887 ntBASIC9.73□□□□□ -0.85
Chd1P40201 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd1P40201 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Chd1P40201 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.72□□□□□ -0.85
Chd1P40201 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms