Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm25593-201ENSMUST00000102272 96 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upk2P38575 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upk2P38575 Gm25093-201ENSMUST00000103993 132 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Gm13739-201ENSMUST00000118020 530 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm15216-201ENSMUST00000118058 277 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm12937-201ENSMUST00000118333 448 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm12540-201ENSMUST00000121938 319 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm8648-201ENSMUST00000122457 221 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Gm23259-201ENSMUST00000158318 303 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upk2P38575 Gm27186-201ENSMUST00000184223 307 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm29156-201ENSMUST00000187764 499 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.69□□□□□ -1.5
Upk2P38575 Gm37376-201ENSMUST00000192176 453 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.69□□□□□ -1.5
Upk2P38575 Gm8190-201ENSMUST00000199603 586 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm44227-201ENSMUST00000203576 241 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk2P38575 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm24036-201ENSMUST00000082868 156 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upk2P38575 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upk2P38575 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Gm37863-201ENSMUST00000194911 1457 ntBASIC5.69□□□□□ -1.5
Upk2P38575 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upk2P38575 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upk2P38575 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.69□□□□□ -1.5
Upk2P38575 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Upk2P38575 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upk2P38575 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm24790-201ENSMUST00000104285 132 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk2P38575 Gm5601-201ENSMUST00000118909 972 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upk2P38575 Gm25550-201ENSMUST00000158079 128 ntBASIC5.68□□□□□ -1.5
Upk2P38575 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm25675-201ENSMUST00000174979 118 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Gm23968-201ENSMUST00000175047 125 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Mir5617-201ENSMUST00000176786 57 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk2P38575 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk2P38575 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.68□□□□□ -1.5
Upk2P38575 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.68□□□□□ -1.5
Upk2P38575 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.68□□□□□ -1.5
Upk2P38575 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk2P38575 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Upk2P38575 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm6436-201ENSMUST00000077163 451 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Upk2P38575 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.68□□□□□ -1.5
Upk2P38575 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Upk2P38575 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upk2P38575 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Upk2P38575 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk2P38575 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.67□□□□□ -1.5
Upk2P38575 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upk2P38575 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk2P38575 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.67□□□□□ -1.5
Upk2P38575 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upk2P38575 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Upk2P38575 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.67□□□□□ -1.5
Upk2P38575 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Upk2P38575 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Upk2P38575 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms