Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Peg13-201ENSMUST00000202826 4725 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm24886-201ENSMUST00000104384 123 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm36401-201ENSMUST00000194255 2028 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm4290-201ENSMUST00000206897 814 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm24200-201ENSMUST00000082955 157 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm24041-201ENSMUST00000083115 156 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm14173-201ENSMUST00000117690 278 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm9517-201ENSMUST00000195021 874 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Mir6539-201ENSMUST00000183732 110 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm18413-201ENSMUST00000221573 655 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm24730-201ENSMUST00000158228 117 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Thoc7-209ENSMUST00000225325 765 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm5087-204ENSMUST00000225820 645 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Gm9386-201ENSMUST00000095195 381 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col6a3E9PWQ3 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
Col6a3E9PWQ3 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.27□□□□□ -1.4
Col6a3E9PWQ3 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm24741-201ENSMUST00000158857 106 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a3E9PWQ3 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms