Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm7252-201ENSMUST00000223284 456 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Lsm1Q8VC85 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm25631-201ENSMUST00000104390 130 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm13679-201ENSMUST00000118678 484 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm10157-201ENSMUST00000139408 343 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm23392-201ENSMUST00000157580 113 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm43390-201ENSMUST00000196614 421 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm21054-201ENSMUST00000203981 380 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm5436-201ENSMUST00000058103 643 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lsm1Q8VC85 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Mir711-201ENSMUST00000102188 82 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm13983-201ENSMUST00000118018 865 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm14755-201ENSMUST00000118037 384 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm12072-201ENSMUST00000118293 715 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm15621-201ENSMUST00000119162 364 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm16138-201ENSMUST00000159341 821 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm23810-201ENSMUST00000175150 74 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm26587-201ENSMUST00000180795 989 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm8506-201ENSMUST00000186661 829 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm5334-201ENSMUST00000187472 720 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm9114-201ENSMUST00000188558 997 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm5575-201ENSMUST00000190879 398 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms