Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Trim47Q8C0E3 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm42755-201ENSMUST00000198533 1493 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm43498-201ENSMUST00000202002 1486 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm25083-201ENSMUST00000102319 92 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm13574-201ENSMUST00000120482 394 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm15116-201ENSMUST00000122248 663 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm24002-201ENSMUST00000158456 104 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm8550-201ENSMUST00000161621 653 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm23633-201ENSMUST00000175293 119 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm44989-201ENSMUST00000204749 217 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm44800-201ENSMUST00000207510 1855 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm42455-201ENSMUST00000199761 2736 ntBASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim47Q8C0E3 Npr3-204ENSMUST00000228489 1969 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 CT009734.1-201ENSMUST00000227657 1687 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm24284-201ENSMUST00000104240 142 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm7129-201ENSMUST00000117402 997 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm13739-201ENSMUST00000118020 530 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm11416-201ENSMUST00000119111 863 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms