Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm11879-201ENSMUST00000121885 702 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm13487-201ENSMUST00000122240 864 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm20620-201ENSMUST00000177528 168 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm3650-201ENSMUST00000180600 747 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm43233-201ENSMUST00000200491 616 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm43850-201ENSMUST00000202021 578 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm20177-201ENSMUST00000203705 334 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 CT009556.1-201ENSMUST00000227282 449 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm6990-201ENSMUST00000086830 348 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm5702-201ENSMUST00000185629 2469 ntBASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp40Q8BWR4 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm13702-201ENSMUST00000118542 825 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm14791-201ENSMUST00000119061 1166 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm13222-201ENSMUST00000119638 138 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm12229-201ENSMUST00000120487 468 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm12307-201ENSMUST00000120581 590 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm7212-201ENSMUST00000120817 348 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Rps29-ps-201ENSMUST00000122083 172 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm23884-201ENSMUST00000122687 294 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Mir1960-201ENSMUST00000157488 78 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm18781-201ENSMUST00000211252 924 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm45448-201ENSMUST00000211739 209 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 AC134439.1-201ENSMUST00000220923 600 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 AC073562.1-201ENSMUST00000222117 401 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 AC156559.2-201ENSMUST00000224403 384 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 AC170086.2-201ENSMUST00000224733 803 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm42478-201ENSMUST00000199252 1467 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm43728-201ENSMUST00000198817 2622 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Usp40Q8BWR4 Gm37169-201ENSMUST00000195599 4161 ntBASIC9.13□□□□□ -0.95
Usp40Q8BWR4 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Usp40Q8BWR4 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms