Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm16391-201ENSMUST00000086601 447 ntBASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scaf4Q6PFF0 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm15616-201ENSMUST00000118662 375 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm5319-201ENSMUST00000118965 873 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm14830-201ENSMUST00000121899 700 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm22882-201ENSMUST00000157749 124 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm18588-201ENSMUST00000177308 492 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm9451-201ENSMUST00000188491 604 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm38306-201ENSMUST00000193954 237 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm43390-201ENSMUST00000196614 421 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm43090-201ENSMUST00000202459 314 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm45478-201ENSMUST00000209472 211 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm8168-201ENSMUST00000209631 948 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm18243-201ENSMUST00000220756 887 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scaf4Q6PFF0 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Scaf4Q6PFF0 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scaf4Q6PFF0 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.97□□□□□ -1.29
Scaf4Q6PFF0 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms