Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm22748-201ENSMUST00000082493 136 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm25926-201ENSMUST00000082899 160 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm24522-201ENSMUST00000083964 108 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clcn1Q64347 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC9.69□□□□□ -0.86
Clcn1Q64347 Gm20045-201ENSMUST00000192658 5577 ntBASIC9.69□□□□□ -0.86
Clcn1Q64347 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm37010-201ENSMUST00000194539 1704 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 AC154323.3-201ENSMUST00000226927 1660 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm42455-201ENSMUST00000199761 2736 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm11880-201ENSMUST00000117612 399 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm12090-201ENSMUST00000118692 758 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm14531-201ENSMUST00000120845 285 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm14122-201ENSMUST00000122076 973 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm21181-201ENSMUST00000186249 330 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm29562-201ENSMUST00000190113 904 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm28164-201ENSMUST00000190143 442 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm38030-201ENSMUST00000192376 475 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm43295-201ENSMUST00000201439 412 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm9652-201ENSMUST00000209345 163 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm8290-201ENSMUST00000218202 477 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm8137-201ENSMUST00000218997 463 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 AC238940.2-201ENSMUST00000224202 330 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Clcn1Q64347 n-R5s196-201ENSMUST00000083136 117 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clcn1Q64347 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.68□□□□□ -0.86
Clcn1Q64347 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.68□□□□□ -0.86
Clcn1Q64347 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 AC131743.4-201ENSMUST00000221638 1553 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm43606-201ENSMUST00000195938 3556 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm18830-201ENSMUST00000199036 1396 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm11984-201ENSMUST00000118142 766 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm13735-201ENSMUST00000120217 670 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm23897-201ENSMUST00000158110 158 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm18191-201ENSMUST00000174624 824 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm25690-201ENSMUST00000175439 77 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm28802-201ENSMUST00000188624 944 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm38221-201ENSMUST00000195146 365 ntBASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC9.67□□□□□ -0.86
Clcn1Q64347 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Clcn1Q64347 CT954323.2-201ENSMUST00000222056 213 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms