Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm3544-201ENSMUST00000196129 305 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm44768-201ENSMUST00000205719 393 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm19033-201ENSMUST00000208516 964 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm46223-201ENSMUST00000215196 675 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm19116-201ENSMUST00000218592 642 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm9292-201ENSMUST00000222008 710 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a6B1AVK5 Gm38043-201ENSMUST00000195501 5141 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 AC153940.1-201ENSMUST00000220149 5300 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm13013-201ENSMUST00000119087 523 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm18781-201ENSMUST00000211252 924 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm10688-201ENSMUST00000214985 520 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm5080-201ENSMUST00000220341 743 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm18405-201ENSMUST00000220743 511 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm36262-201ENSMUST00000223274 499 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm22053-201ENSMUST00000083394 200 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Mir298-201ENSMUST00000083476 82 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a6B1AVK5 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm8534-201ENSMUST00000118553 766 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm16139-201ENSMUST00000160015 420 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm2058-201ENSMUST00000178791 560 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm27219-201ENSMUST00000184633 742 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm7891-201ENSMUST00000190284 843 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm37609-201ENSMUST00000191778 678 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm37233-201ENSMUST00000192173 6263 ntBASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col4a6B1AVK5 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms