Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1bQ9Z2C6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1bQ9Z2C6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1bQ9Z2C6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1bQ9Z2C6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1bQ9Z2C6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1bQ9Z2C6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Upk1bQ9Z2C6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Tgds-204ENSMUST00000228543 1594 ntBASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1bQ9Z2C6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1bQ9Z2C6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk1bQ9Z2C6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk1bQ9Z2C6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk1bQ9Z2C6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk1bQ9Z2C6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk1bQ9Z2C6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms