Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.05■□□□□ 0.32
Cldn6Q9Z262 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn6Q9Z262 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn6Q9Z262 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn6Q9Z262 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn6Q9Z262 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Cldn6Q9Z262 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Fst-202ENSMUST00000223640 2612 ntBASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn6Q9Z262 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn6Q9Z262 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn6Q9Z262 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Gm7290-201ENSMUST00000104990 617 ntBASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Gm12918-201ENSMUST00000120234 636 ntBASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Gm15710-201ENSMUST00000121821 636 ntBASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Gm5075-201ENSMUST00000196916 622 ntBASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn6Q9Z262 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn6Q9Z262 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Cldn6Q9Z262 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Gm7291-201ENSMUST00000199147 382 ntBASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn6Q9Z262 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cldn6Q9Z262 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17■□□□□ 0.31
Cldn6Q9Z262 Gm6211-202ENSMUST00000167849 925 ntBASIC17■□□□□ 0.31
Cldn6Q9Z262 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Gm37563-201ENSMUST00000192580 1513 ntBASIC17■□□□□ 0.31
Cldn6Q9Z262 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Cldn6Q9Z262 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn6Q9Z262 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn6Q9Z262 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms