Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ggps1Q9WTN0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ggps1Q9WTN0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.18■□□□□ 0.82
Ggps1Q9WTN0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ggps1Q9WTN0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Gm9987-201ENSMUST00000069768 567 ntBASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ggps1Q9WTN0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ggps1Q9WTN0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ggps1Q9WTN0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ggps1Q9WTN0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Gm12382-201ENSMUST00000122005 922 ntBASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Gm43799-201ENSMUST00000201845 579 ntBASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.13■□□□□ 0.81
Ggps1Q9WTN0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms