Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh5Q9QUM7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh5Q9QUM7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Msh5Q9QUM7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh5Q9QUM7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh5Q9QUM7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Gm37102-201ENSMUST00000195740 1105 ntBASIC18.49■□□□□ 0.55
Msh5Q9QUM7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh5Q9QUM7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 AV356131-201ENSMUST00000206201 750 ntBASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Msh5Q9QUM7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh5Q9QUM7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms