Protein–RNA interactions for Protein: Q9JKB1

Uchl3, Ubiquitin carboxyl-terminal hydrolase isozyme L3, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl3Q9JKB1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Gm18671-201ENSMUST00000214826 683 ntBASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uchl3Q9JKB1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Gm5874-201ENSMUST00000096101 508 ntBASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.28■□□□□ 0.68
Uchl3Q9JKB1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Uchl3Q9JKB1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Uchl3Q9JKB1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Uchl3Q9JKB1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Uchl3Q9JKB1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Uchl3Q9JKB1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.26■□□□□ 0.67
Uchl3Q9JKB1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Uchl3Q9JKB1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 AV356131-201ENSMUST00000206201 750 ntBASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Uchl3Q9JKB1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Uchl3Q9JKB1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms