Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Fst-202ENSMUST00000223640 2612 ntBASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rcl1Q9JJT0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rcl1Q9JJT0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rcl1Q9JJT0 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.33■□□□□ 0.05
Rcl1Q9JJT0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rcl1Q9JJT0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rcl1Q9JJT0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rcl1Q9JJT0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rcl1Q9JJT0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rcl1Q9JJT0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Gm27801-201ENSMUST00000184174 223 ntBASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.31■□□□□ 0.04
Rcl1Q9JJT0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rcl1Q9JJT0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rcl1Q9JJT0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rcl1Q9JJT0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rcl1Q9JJT0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rcl1Q9JJT0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rcl1Q9JJT0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms