Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OtofQ9ESF1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.13■□□□□ 0.49
OtofQ9ESF1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.13■□□□□ 0.49
OtofQ9ESF1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.13■□□□□ 0.49
OtofQ9ESF1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.13■□□□□ 0.49
OtofQ9ESF1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OtofQ9ESF1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.12■□□□□ 0.49
OtofQ9ESF1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtofQ9ESF1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtofQ9ESF1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
OtofQ9ESF1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtofQ9ESF1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
OtofQ9ESF1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.11■□□□□ 0.49
OtofQ9ESF1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtofQ9ESF1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.1■□□□□ 0.49
OtofQ9ESF1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.1■□□□□ 0.49
OtofQ9ESF1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
OtofQ9ESF1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Timm23-208ENSMUST00000226683 750 ntBASIC18.1■□□□□ 0.49
OtofQ9ESF1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.1■□□□□ 0.49
OtofQ9ESF1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
OtofQ9ESF1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtofQ9ESF1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
OtofQ9ESF1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
OtofQ9ESF1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtofQ9ESF1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtofQ9ESF1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtofQ9ESF1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtofQ9ESF1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.07■□□□□ 0.48
OtofQ9ESF1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms