Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp4Q9ER80 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp4Q9ER80 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp4Q9ER80 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp4Q9ER80 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rtp4Q9ER80 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.02■□□□□ 0.32
Rtp4Q9ER80 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtp4Q9ER80 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtp4Q9ER80 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtp4Q9ER80 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rtp4Q9ER80 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtp4Q9ER80 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtp4Q9ER80 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Gm8520-201ENSMUST00000186517 868 ntBASIC17■□□□□ 0.31
Rtp4Q9ER80 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17■□□□□ 0.31
Rtp4Q9ER80 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rtp4Q9ER80 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtp4Q9ER80 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Gm13168-201ENSMUST00000121771 632 ntBASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtp4Q9ER80 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtp4Q9ER80 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtp4Q9ER80 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms