Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Odf3b-204ENSMUST00000227834 930 ntBASIC16.4■□□□□ 0.22
Barx1Q9ER42 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.4■□□□□ 0.22
Barx1Q9ER42 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Barx1Q9ER42 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.39■□□□□ 0.21
Barx1Q9ER42 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Timm23-208ENSMUST00000226683 750 ntBASIC16.38■□□□□ 0.21
Barx1Q9ER42 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Zfp783-201ENSMUST00000095946 670 ntBASIC16.38■□□□□ 0.21
Barx1Q9ER42 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Barx1Q9ER42 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.37■□□□□ 0.21
Barx1Q9ER42 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Barx1Q9ER42 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Gm15375-201ENSMUST00000119510 849 ntBASIC16.36■□□□□ 0.21
Barx1Q9ER42 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Gm7367-201ENSMUST00000057611 492 ntBASIC16.36■□□□□ 0.21
Barx1Q9ER42 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Barx1Q9ER42 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Barx1Q9ER42 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Barx1Q9ER42 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Barx1Q9ER42 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Barx1Q9ER42 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms