Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.09■□□□□ 0.33
Hmgn3Q9DCB1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Hmgn3Q9DCB1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn3Q9DCB1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn3Q9DCB1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn3Q9DCB1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn3Q9DCB1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Rps24-207ENSMUST00000224568 714 ntBASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn3Q9DCB1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Gm14117-201ENSMUST00000122417 843 ntBASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn3Q9DCB1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgn3Q9DCB1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.05■□□□□ 0.32
Hmgn3Q9DCB1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms