Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne8Q9DC53 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Gm18284-201ENSMUST00000172604 624 ntBASIC18.97■□□□□ 0.63
Cpne8Q9DC53 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne8Q9DC53 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne8Q9DC53 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne8Q9DC53 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.94■□□□□ 0.62
Cpne8Q9DC53 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne8Q9DC53 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne8Q9DC53 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms