Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Rrp8Q9DB85 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rrp8Q9DB85 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.83■□□□□ 0.45
Rrp8Q9DB85 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rrp8Q9DB85 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rrp8Q9DB85 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Timm23-208ENSMUST00000226683 750 ntBASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rrp8Q9DB85 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Gm37292-201ENSMUST00000192062 758 ntBASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rrp8Q9DB85 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rrp8Q9DB85 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rrp8Q9DB85 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Mir6349-201ENSMUST00000184059 97 ntBASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rrp8Q9DB85 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Golph3-202ENSMUST00000226517 2359 ntBASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.78■□□□□ 0.44
Rrp8Q9DB85 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Gm11539-201ENSMUST00000119837 557 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms