Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mbd3l1Q9D9H3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mbd3l1Q9D9H3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Mbd3l1Q9D9H3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Gm6821-201ENSMUST00000107540 542 ntBASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mbd3l1Q9D9H3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mbd3l1Q9D9H3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mbd3l1Q9D9H3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Mbd3l1Q9D9H3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms