Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tube1Q9D6T1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tube1Q9D6T1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tube1Q9D6T1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tube1Q9D6T1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Gm12896-201ENSMUST00000118430 226 ntBASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tube1Q9D6T1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.19■□□□□ 0.82
Tube1Q9D6T1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tube1Q9D6T1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tube1Q9D6T1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.17■□□□□ 0.82
Tube1Q9D6T1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms