Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssr1Q9CY50 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ssr1Q9CY50 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssr1Q9CY50 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ssr1Q9CY50 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssr1Q9CY50 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ssr1Q9CY50 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.66■□□□□ 0.74
Ssr1Q9CY50 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssr1Q9CY50 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.65■□□□□ 0.74
Ssr1Q9CY50 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.65■□□□□ 0.74
Ssr1Q9CY50 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ssr1Q9CY50 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Ssr1Q9CY50 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssr1Q9CY50 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssr1Q9CY50 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Reep4-203ENSMUST00000226563 1444 ntBASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.64■□□□□ 0.73
Ssr1Q9CY50 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssr1Q9CY50 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssr1Q9CY50 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms