Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrc40Q9CRC8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrc40Q9CRC8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Gm18284-201ENSMUST00000172604 624 ntBASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrc40Q9CRC8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrc40Q9CRC8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrc40Q9CRC8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms