Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldnd1Q9CQX5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Gm7284-201ENSMUST00000131667 944 ntBASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cldnd1Q9CQX5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldnd1Q9CQX5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldnd1Q9CQX5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cldnd1Q9CQX5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Gm38027-201ENSMUST00000192315 235 ntBASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldnd1Q9CQX5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms