Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Gm5921-201ENSMUST00000075898 882 ntBASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTRAFQ9CQE8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTRAFQ9CQE8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTRAFQ9CQE8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTRAFQ9CQE8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTRAFQ9CQE8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RTRAFQ9CQE8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTRAFQ9CQE8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTRAFQ9CQE8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RTRAFQ9CQE8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTRAFQ9CQE8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTRAFQ9CQE8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTRAFQ9CQE8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms