Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1Q9CQ70 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
H2afb1Q9CQ70 Rarb-207ENSMUST00000225921 2756 ntBASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1Q9CQ70 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Gm22325-201ENSMUST00000158904 308 ntBASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1Q9CQ70 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Tgds-204ENSMUST00000228543 1594 ntBASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2afb1Q9CQ70 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.84□□□□□ -0.03
H2afb1Q9CQ70 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms