Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim11Q99PQ2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim11Q99PQ2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim11Q99PQ2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Gm22325-201ENSMUST00000158904 308 ntBASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Trim11Q99PQ2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.69■□□□□ 0.9
Trim11Q99PQ2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim11Q99PQ2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Fst-202ENSMUST00000223640 2612 ntBASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Tgds-204ENSMUST00000228543 1594 ntBASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Trim11Q99PQ2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim11Q99PQ2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms