Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.01■□□□□ 0.47
Trim33Q99PP7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18■□□□□ 0.47
Trim33Q99PP7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18■□□□□ 0.47
Trim33Q99PP7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Trim33Q99PP7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim33Q99PP7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18■□□□□ 0.47
Trim33Q99PP7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim33Q99PP7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.99■□□□□ 0.47
Trim33Q99PP7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim33Q99PP7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.98■□□□□ 0.47
Trim33Q99PP7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.98■□□□□ 0.47
Trim33Q99PP7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.98■□□□□ 0.47
Trim33Q99PP7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim33Q99PP7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.97■□□□□ 0.47
Trim33Q99PP7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim33Q99PP7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.96■□□□□ 0.47
Trim33Q99PP7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.96■□□□□ 0.47
Trim33Q99PP7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim33Q99PP7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim33Q99PP7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms