Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf11Q99JX1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.3■□□□□ 0.36
Taf11Q99JX1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf11Q99JX1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.29■□□□□ 0.36
Taf11Q99JX1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Taf11Q99JX1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf11Q99JX1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.28■□□□□ 0.36
Taf11Q99JX1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Taf11Q99JX1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Taf11Q99JX1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Taf11Q99JX1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.26■□□□□ 0.35
Taf11Q99JX1 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.26■□□□□ 0.35
Taf11Q99JX1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.26■□□□□ 0.35
Taf11Q99JX1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Taf11Q99JX1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms