Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.99■□□□□ 0.95
Rfc4Q99J62 Gm11539-201ENSMUST00000119837 557 ntBASIC20.99■□□□□ 0.95
Rfc4Q99J62 Gm13436-201ENSMUST00000120418 567 ntBASIC20.99■□□□□ 0.95
Rfc4Q99J62 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rfc4Q99J62 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.99■□□□□ 0.95
Rfc4Q99J62 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc4Q99J62 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc4Q99J62 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.98■□□□□ 0.95
Rfc4Q99J62 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.98■□□□□ 0.95
Rfc4Q99J62 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc4Q99J62 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfc4Q99J62 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfc4Q99J62 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rfc4Q99J62 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Gm12382-201ENSMUST00000122005 922 ntBASIC20.96■□□□□ 0.95
Rfc4Q99J62 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.96■□□□□ 0.95
Rfc4Q99J62 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfc4Q99J62 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Rfc4Q99J62 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Gm21362-201ENSMUST00000194272 928 ntBASIC20.95■□□□□ 0.94
Rfc4Q99J62 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfc4Q99J62 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Gm7889-201ENSMUST00000185591 958 ntBASIC20.94■□□□□ 0.94
Rfc4Q99J62 Gm3375-201ENSMUST00000203929 796 ntBASIC20.94■□□□□ 0.94
Rfc4Q99J62 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.94■□□□□ 0.94
Rfc4Q99J62 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfc4Q99J62 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Mir6349-201ENSMUST00000184059 97 ntBASIC20.93■□□□□ 0.94
Rfc4Q99J62 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfc4Q99J62 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms