Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col20a1Q923P0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Col20a1Q923P0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Col20a1Q923P0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
Col20a1Q923P0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.52■■□□□ 1.03
Col20a1Q923P0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col20a1Q923P0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col20a1Q923P0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col20a1Q923P0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col20a1Q923P0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col20a1Q923P0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Col20a1Q923P0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.51■■□□□ 1.03
Col20a1Q923P0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col20a1Q923P0 Gm43183-201ENSMUST00000200632 547 ntBASIC21.51■■□□□ 1.03
Col20a1Q923P0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.51■■□□□ 1.03
Col20a1Q923P0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col20a1Q923P0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.5■■□□□ 1.03
Col20a1Q923P0 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.5■■□□□ 1.03
Col20a1Q923P0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.5■■□□□ 1.03
Col20a1Q923P0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Mir7071-201ENSMUST00000184847 69 ntBASIC21.49■■□□□ 1.03
Col20a1Q923P0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.49■■□□□ 1.03
Col20a1Q923P0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.49■■□□□ 1.03
Col20a1Q923P0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col20a1Q923P0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Gm42545-201ENSMUST00000202755 922 ntBASIC21.48■■□□□ 1.03
Col20a1Q923P0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col20a1Q923P0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.47■■□□□ 1.03
Col20a1Q923P0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Gm37055-201ENSMUST00000191866 133 ntBASIC21.47■■□□□ 1.03
Col20a1Q923P0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Col20a1Q923P0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Col20a1Q923P0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col20a1Q923P0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Col20a1Q923P0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.45■■□□□ 1.02
Col20a1Q923P0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Mir5122-201ENSMUST00000175004 89 ntBASIC21.45■■□□□ 1.02
Col20a1Q923P0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Gm37292-201ENSMUST00000192062 758 ntBASIC21.45■■□□□ 1.02
Col20a1Q923P0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col20a1Q923P0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col20a1Q923P0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms