Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Gm14117-201ENSMUST00000122417 843 ntBASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp1aQ921W0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Gm12922-201ENSMUST00000120626 809 ntBASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.04■□□□□ 0.16
Chmp1aQ921W0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Fst-202ENSMUST00000223640 2612 ntBASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Gm45102-201ENSMUST00000207427 857 ntBASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chmp1aQ921W0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Rps24-207ENSMUST00000224568 714 ntBASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp1aQ921W0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp1aQ921W0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp1aQ921W0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp1aQ921W0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chmp1aQ921W0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms