Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhb20Q91XZ9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb20Q91XZ9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb20Q91XZ9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb20Q91XZ9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhb20Q91XZ9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb20Q91XZ9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb20Q91XZ9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms