Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhb5Q91XZ5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Gm21814-202ENSMUST00000203277 873 ntBASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb5Q91XZ5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Gm6433-201ENSMUST00000118634 875 ntBASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb5Q91XZ5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Gm12382-201ENSMUST00000122005 922 ntBASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.48■■□□□ 1.03
Pcdhb5Q91XZ5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb5Q91XZ5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Gm30025-201ENSMUST00000218555 728 ntBASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb5Q91XZ5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb5Q91XZ5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb5Q91XZ5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Timm23-208ENSMUST00000226683 750 ntBASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb5Q91XZ5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms