Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Gm12933-201ENSMUST00000120203 872 ntBASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Gm26524-201ENSMUST00000192339 390 ntBASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb6Q91XZ4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Mir5133-201ENSMUST00000174955 77 ntBASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb6Q91XZ4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Fst-202ENSMUST00000223640 2612 ntBASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb6Q91XZ4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhb6Q91XZ4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb6Q91XZ4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms