Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Gm43173-201ENSMUST00000202246 593 ntBASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Gm13241-201ENSMUST00000094493 780 ntBASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb2Q91XX7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb2Q91XX7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb2Q91XX7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhgb2Q91XX7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgb2Q91XX7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Pcdhgb2Q91XX7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgb2Q91XX7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgb2Q91XX7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb2Q91XX7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb2Q91XX7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgb2Q91XX7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms