Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb4Q91XX6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Gm10849-201ENSMUST00000100397 618 ntBASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb4Q91XX6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb4Q91XX6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb4Q91XX6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhgb4Q91XX6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Gm42569-201ENSMUST00000200539 472 ntBASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb4Q91XX6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb4Q91XX6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms