Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Gm10252-201ENSMUST00000209541 832 ntBASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 BC021767-201ENSMUST00000126387 1716 ntBASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx41Q91VN6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Gm2559-201ENSMUST00000201323 363 ntBASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx41Q91VN6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Gm44549-201ENSMUST00000208351 577 ntBASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Dio3-201ENSMUST00000097228 1449 ntBASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ddx41Q91VN6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx41Q91VN6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Ddx41Q91VN6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx41Q91VN6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx41Q91VN6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx41Q91VN6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms