Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdh18Q8VHR0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh18Q8VHR0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh18Q8VHR0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Gm43173-201ENSMUST00000202246 593 ntBASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh18Q8VHR0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh18Q8VHR0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Pcdh18Q8VHR0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdh18Q8VHR0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms