Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab40bQ8VHP8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab40bQ8VHP8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab40bQ8VHP8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Gm9847-201ENSMUST00000052528 599 ntBASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40bQ8VHP8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.35■□□□□ 0.21
Rab40bQ8VHP8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40bQ8VHP8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Rab40bQ8VHP8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab40bQ8VHP8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab40bQ8VHP8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab40bQ8VHP8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40bQ8VHP8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40bQ8VHP8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms