Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkd2Q8VE28 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.58■□□□□ 0.25
Nkd2Q8VE28 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkd2Q8VE28 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkd2Q8VE28 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Gm20049-201ENSMUST00000219950 730 ntBASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkd2Q8VE28 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkd2Q8VE28 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkd2Q8VE28 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Gm13168-201ENSMUST00000121771 632 ntBASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.55■□□□□ 0.24
Nkd2Q8VE28 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.55■□□□□ 0.24
Nkd2Q8VE28 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkd2Q8VE28 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkd2Q8VE28 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms