Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.71■□□□□ 0.59
Rprd1aQ8VDS4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rprd1aQ8VDS4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rprd1aQ8VDS4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Gm2399-201ENSMUST00000104944 225 ntBASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rprd1aQ8VDS4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rprd1aQ8VDS4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rprd1aQ8VDS4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rprd1aQ8VDS4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms