Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Uhrf1Q8VDF2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Uhrf1Q8VDF2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Gm7367-201ENSMUST00000057611 492 ntBASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uhrf1Q8VDF2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
Uhrf1Q8VDF2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Gm18959-201ENSMUST00000208954 655 ntBASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Uhrf1Q8VDF2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uhrf1Q8VDF2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uhrf1Q8VDF2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uhrf1Q8VDF2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Uhrf1Q8VDF2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Uhrf1Q8VDF2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.77■□□□□ 0.6
Uhrf1Q8VDF2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Uhrf1Q8VDF2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.77■□□□□ 0.6
Uhrf1Q8VDF2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Uhrf1Q8VDF2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Uhrf1Q8VDF2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms