Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gm12441-201ENSMUST00000121806 588 ntBASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf3c5Q8R2T8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Gm44549-201ENSMUST00000208351 577 ntBASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf3c5Q8R2T8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf3c5Q8R2T8 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gtf3c5Q8R2T8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf3c5Q8R2T8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf3c5Q8R2T8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gtf3c5Q8R2T8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c5Q8R2T8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c5Q8R2T8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.18■□□□□ 0.98
Gtf3c5Q8R2T8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf3c5Q8R2T8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms